Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939934.1_cds_XP_016484320.1_75346
CDS Infomation

[gene=LOC107804890] [db_xref=GeneID:107804890] [protein=AP-3 complex subunit delta-like] [protein_id=XP_016484320.1] [location=complement(23781..26696)] [gbkey=CDS]
Sequence

ATGGCCGGTGGTCCGTCTCTTCTCGATTCTCTCTTCCAGCGATCTTTAGAAGACTTAATT
AAAGGTCTCCGTCTCTACGTCGGCGACGAATCAACTTTCATCTCCAAAGCCGTCGACGAG
ATCCGCCGCGAAATCAAGTCCACCGATCAGCAGACAAAAGCAACCGCCCTTCAGAAACTC
ACTTACTTGCACTCAATTCATGGCGTCGACATGTCGTGGGCTGCTTTTCACGCTATAGAA
CTCTCTTCCTCTCAGTCTTTCAATTTCAAACGCATTGCTTATCTCGCCGCTTCTCTTTCC
TTCGATCCTTCCACTACTGACGTCATCCTCCTGCTGACTCATCAGCTTCGCAAGGACCTA
TCCTCTCCTAATCCACACGAAGTAAGCCTCGCTCTTCACACTCTTTATTTCATTTCGACT
CCTGATTTAGCTCGTGATTTAACTCCTGAGGTATTCACTTTACTGAATAGTAACAAAGGT
TCTACTAGGAAAAAAGCTATTGCTATTATTTTGAGACTATTCGAGTTGTATCCAGATGCG
GTTAGGGTTTGTTTTAAGAGATTAGTTGAAAATTTGGAGAATTCTGATCCGGCTATTGTA
TCCGCTGTTGTTGGTGTTTTTTGTGAACTTGCTAGCAGAGAACCAAAATCTTATCTCCCG
TTAGCGCCCGAATTTTATAAGATATTGGTAGATTCGCGGAATAATTGGCTGTTGATTAAA
GTTCTGAAGATTTTTGTGAAGTTGGCTCCATTGGAGCCGAGGTTGGGGAAAAAGCTGGTG
GAGCCAATCTGCGATCATTTGAGGAGAACGGGTGCAAAGTCATTGTCTTTTGAATGTGTG
AGGACTATTCTTAGTAGTTTCAGCGAGTATGACTCTGCCGTGAAGCTTTCTGTTGAGAAG
ATTAGGGAGTTTTTGAATGATGATGATCCGAATCTCAAGTATCTCGGTTTGCAAGCACTT
ACTATTGTTGCGCCCAAGCATTTGTGGGCAGTTATGGAGAATAAGGATTTTGTGATTAAA
TCGTTAAGTGATGCGGATGCAAATATTAAACTTGAGGCCTTGCAGCTTGTCATGGCCATG
GTTTCCGAGGATAATATGGCGGAAATTTGCAGGGTTTTGATCAATTATGCTCTTAAGTCA
GACCCAGAGTTTTGTAATGAAATTCTGGAGTGCATCTTGTTGACTTGTTCCAGGAATGTG
TATGAGATAATTGTGGATTTTGATTGGTATGTATCACTTCTTGGGGAAATGTCGAGAATT
CTGCACTGTCAGAAGGGGGAGGAGATAGAGAACCAGCTTGTGGATATAGGCATGAGAGTC
AAAGATGCAAGACCAGAACTTGTTCGAGTTGGCCGTGATTTGCTAATTGATCCTGCGTTG
CTTGGCAATCCTTTCATACACCCGATTTTATCAGCAGCTGCTTGGGTGTCAGGGGAGTAT
GTTCGATTTTCCAAAAACCCATTGGAAATTATGGAAGCACTGTTGCAACCAAGAACCAGT
TTATTGCCGCCATCAATTAAAGCCGTATATATCCAGTCTGCATTTAAAGTACTTACCTTT
TATCTGCATTATGCTATATCTACCGAGGAAGTTATTTCTTCAGCTTCCCAAGGAGTGGCA
GATATAATGCATGGAGCAGTACAAGAGAATTCTCAGTTTGTAAGAGCTGGATTGGTTGCT
GAAAATGACTCAGATGACGGGGGTTTGAATCACAGGATGTTACATCGACCTGTTAGGGAT
GTTTCAGTAGAGAGTTTTGAGGATATGGCTGTTGCTCATGACTGGTTGTCCTCAACTTCC
TTCAAGGGGGAGCCAATCACTGAAGAATCTATTGTTAACATATTAAATCTTGTTGAAACC
ACGCTGGGACCACTAGCAGGAAGCCATGAGGTGGAGATACTGGAGAGGTCAAGAAATGTC
CTTGGTTTGGTTGAATTGGTAAGAGAAGAATTACCTGGTTACTTGGTGAAAAGGGAAGAA
GATAATGACAAGGGACAAAGGAAGACTCATGAAATGATCAAATTAATTGCTGAAGCCTTT
TCGGAAGAGCTCGGTCCAGTTTCAGCAAGTTCTCAGGAAAGGGTACCAATACCTGAAGGA
ATGGTGCTTAATCAAAGTCTGAATGATCTGGATGCCATATGTGGTGACTTCGAGTTGCAT
ATACCTACTTCTTTCTCCCTTGGAAGATCAATTTCCTCCGAAAAGGATGATGTTACCATG
TCTGATCGGCAAGGTAAGGAAGAATTTGAACCAACTGAATCAACATCTCTTCTTGCAGAG
CATCGCAAACGCCATGGGCTATACTATTTACAGTCACAGAAAAAGGAATCGATAAATGAT
GAATACCCACCTGCTAATGACCTCAAGACTGGAGAGAATGCTGATGACAAGGCTGATGAT
CTTATTAAGCTGACAGAACAATCTCTCTTCCCTAAGAAAAAGACAAACCAGGCAAAGCCT
AGGCCTGTAGTAGTGAAACTGGATGATGGAGATGGACCTTTTATCCCCATAAAGAAGGTA
GATTCCAAAGATGACTTAATCTCTGGTGCTGTGAGAGATGTTCTTTTCGGTGATGAAGCC
ACAGCATCATCATCACGAACTAAGAAGTCTGATAAGTCATCTAGTAAGAGAAGACAGAAG
GACAAGTTAGACATAGACAAGTCTTCCGGACCAAAAGAGGATTCTAAATTCATGGAGAAT
TCTGAACTAGAAAATGCAAATTTGAGAAGAAGCAAACGCCATTCTCGTGGTAAAGAGAAG
AAACATAGAAGTAATGCAAAAGATAGAGATGAACATGAAGAGGGAGATAAGCAGAAGGTT
AGCCATCATCATGGCAAGCATAAATCCCGACAAAGGGCAGAAGGGGCTCTAACATTAGCA
GCACAATCACCTGTTATTCCTGATTTTCTTTTGTAG

Peptide Sequence

PEP ID

XP_016484320.1
PEP Infomation

PREDICTED: AP-3 complex subunit delta-like [Nicotiana tabacum]
Sequence

MAGGPSLLDSLFQRSLEDLIKGLRLYVGDESTFISKAVDEIRREIKSTDQQTKATALQKL
TYLHSIHGVDMSWAAFHAIELSSSQSFNFKRIAYLAASLSFDPSTTDVILLLTHQLRKDL
SSPNPHEVSLALHTLYFISTPDLARDLTPEVFTLLNSNKGSTRKKAIAIILRLFELYPDA
VRVCFKRLVENLENSDPAIVSAVVGVFCELASREPKSYLPLAPEFYKILVDSRNNWLLIK
VLKIFVKLAPLEPRLGKKLVEPICDHLRRTGAKSLSFECVRTILSSFSEYDSAVKLSVEK
IREFLNDDDPNLKYLGLQALTIVAPKHLWAVMENKDFVIKSLSDADANIKLEALQLVMAM
VSEDNMAEICRVLINYALKSDPEFCNEILECILLTCSRNVYEIIVDFDWYVSLLGEMSRI
LHCQKGEEIENQLVDIGMRVKDARPELVRVGRDLLIDPALLGNPFIHPILSAAAWVSGEY
VRFSKNPLEIMEALLQPRTSLLPPSIKAVYIQSAFKVLTFYLHYAISTEEVISSASQGVA
DIMHGAVQENSQFVRAGLVAENDSDDGGLNHRMLHRPVRDVSVESFEDMAVAHDWLSSTS
FKGEPITEESIVNILNLVETTLGPLAGSHEVEILERSRNVLGLVELVREELPGYLVKREE
DNDKGQRKTHEMIKLIAEAFSEELGPVSASSQERVPIPEGMVLNQSLNDLDAICGDFELH
IPTSFSLGRSISSEKDDVTMSDRQGKEEFEPTESTSLLAEHRKRHGLYYLQSQKKESIND
EYPPANDLKTGENADDKADDLIKLTEQSLFPKKKTNQAKPRPVVVKLDDGDGPFIPIKKV
DSKDDLISGAVRDVLFGDEATASSSRTKKSDKSSSKRRQKDKLDIDKSSGPKEDSKFMEN
SELENANLRRSKRHSRGKEKKHRSNAKDRDEHEEGDKQKVSHHHGKHKSRQRAEGALTLA
AQSPVIPDFLL

Transcript Sequence

Gene sequence data has not been registered.